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Software

OutSplice

R package to calculate outlier junction etxpression in umor samples compared to normal.

OutSplice Formatter

A command line tool to combine and format STAR and RSEM results into matrices for OutSplice.

SINE

SINE (Splice Isoform Neoantigen Evaluator) is a command line tool that can be used to identify immunogenic peptides spanning an alternatively spliced junction event.

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