top of page

Software

OutSplice

R package to calculate outlier junction etxpression in umor samples compared to normal.

OutSplice Formatter

A command line tool to combine and format STAR and RSEM results into matrices for OutSplice.

SINE

SINE (Splice Isoform Neoantigen Evaluator) is a command line tool that can be used to identify immunogenic peptides spanning an alternatively spliced junction event.

Contact

Theresa Guo

twguo@health.ucsd.edu, Principal Investigator

UC San Diego Health

Moores Cancer Center

​

3855 Health Sciences Dr, San Diego, CA 92037

© 2023 Guo Lab, UC San Diego. All Rights Reserved.

bottom of page